Package | Description |
---|---|
org.ginsim.gui.graph |
Common GUI for all graphs, and definition of hooks for specialised parts.
|
org.ginsim.gui.graph.dynamicgraph |
Specialised GUI for the State Transition Graphs
|
org.ginsim.gui.graph.hierarchicaltransitiongraph |
Specialised GUI for the Hierarchical Transition Graphs
|
org.ginsim.gui.graph.reducedgraph |
Specialised GUI for the Reduced Graphs (Graph of the SCC)
|
org.ginsim.gui.graph.regulatorygraph |
Specialised GUI for the Regulatory graphs
|
org.ginsim.gui.graph.regulatorygraph.logicalfunction |
GUI to view and edit logical functions associated to Regulatory Nodes
|
org.ginsim.gui.graph.trapspacetree | |
org.ginsim.gui.graph.tree |
Specialised GUI for the graphs representing logical functions.
|
org.ginsim.gui.graph.view.style |
GUI for the definition of styles associated to graph elements.
|
org.ginsim.gui.shell.editpanel |
Define edit panels: panels which follow graph selection events.
|
org.ginsim.gui.utils.data |
Widgets and panels to handle datasets: mostly list edition/selection panels.
|
org.ginsim.service.tool.reg2dyn.limitedsimulation |
Modifier and Type | Method and Description |
---|---|
GUIEditor<E> |
GraphGUI.getEdgeEditionPanel() |
GUIEditor<E> |
BaseGraphGUI.getEdgeEditionPanel() |
GUIEditor<E> |
GraphGUIHelper.getEdgeEditionPanel(G graph)
Create an edition panel for edges.
|
GUIEditor<G> |
GraphGUI.getMainEditionPanel() |
GUIEditor<G> |
BaseGraphGUI.getMainEditionPanel() |
GUIEditor<G> |
GraphGUIHelper.getMainEditionPanel(G graph)
Create an edition panel for the graph itself.
|
GUIEditor<V> |
GraphGUI.getNodeEditionPanel() |
GUIEditor<V> |
BaseGraphGUI.getNodeEditionPanel() |
GUIEditor<V> |
GraphGUIHelper.getNodeEditionPanel(G graph)
Create an edition panel for nodes.
|
Modifier and Type | Class and Description |
---|---|
class |
DynamicItemAttributePanel
basic info on a vertex of the state transition graph (ie state of the system)
|
class |
StateTransitionGraphEditor |
Modifier and Type | Method and Description |
---|---|
GUIEditor<DynamicEdge> |
DynamicGraphGUIHelper.getEdgeEditionPanel(DynamicGraph graph) |
GUIEditor<DynamicGraph> |
DynamicGraphGUIHelper.getMainEditionPanel(DynamicGraph graph) |
GUIEditor<DynamicNode> |
DynamicGraphGUIHelper.getNodeEditionPanel(DynamicGraph graph) |
Modifier and Type | Class and Description |
---|---|
class |
HierarchicalEdgeParameterPanel |
class |
HierarchicalGraphEditor |
class |
HierarchicalNodeParameterPanel |
Modifier and Type | Method and Description |
---|---|
GUIEditor<DecisionOnEdge> |
HierarchicalTransitionGraphGUIHelper.getEdgeEditionPanel(HierarchicalTransitionGraph graph) |
GUIEditor<HierarchicalTransitionGraph> |
HierarchicalTransitionGraphGUIHelper.getMainEditionPanel(HierarchicalTransitionGraph graph) |
GUIEditor<HierarchicalNode> |
HierarchicalTransitionGraphGUIHelper.getNodeEditionPanel(HierarchicalTransitionGraph graph) |
Modifier and Type | Class and Description |
---|---|
class |
ReducedParameterPanel
this panel display some info about a strong component node:
it'll mainly display the list of "real nodes" present in this node
|
Modifier and Type | Method and Description |
---|---|
GUIEditor<Edge<NodeReducedData>> |
ReducedGraphGUIHelper.getEdgeEditionPanel(ReducedGraph graph) |
GUIEditor<ReducedGraph<?,?,?>> |
ReducedGraphGUIHelper.getMainEditionPanel(ReducedGraph graph) |
GUIEditor<NodeReducedData> |
ReducedGraphGUIHelper.getNodeEditionPanel(ReducedGraph graph) |
Modifier and Type | Class and Description |
---|---|
class |
InteractionPanel
Panel to edit interaction of a gene
|
class |
RegulatoryEdgeEditor |
class |
RegulatoryGraphEditor |
class |
RegulatoryNodeEditor |
Modifier and Type | Method and Description |
---|---|
GUIEditor<RegulatoryMultiEdge> |
RegulatoryGraphGUIHelper.getEdgeEditionPanel(RegulatoryGraph graph) |
GUIEditor<RegulatoryGraph> |
RegulatoryGraphGUIHelper.getMainEditionPanel(RegulatoryGraph graph) |
GUIEditor<RegulatoryNode> |
RegulatoryGraphGUIHelper.getNodeEditionPanel(RegulatoryGraph graph) |
Modifier and Type | Class and Description |
---|---|
class |
LogicalFunctionPanel |
class |
LogicalFunctionTreePanel |
Modifier and Type | Class and Description |
---|---|
class |
TrapSpaceTreeMainPanel |
Modifier and Type | Method and Description |
---|---|
GUIEditor<TrapSpaceInclusion> |
TrapSpaceTreeGUIHelper.getEdgeEditionPanel(TrapSpaceInclusionDiagram tree) |
GUIEditor<TrapSpaceInclusionDiagram> |
TrapSpaceTreeGUIHelper.getMainEditionPanel(TrapSpaceInclusionDiagram tree) |
GUIEditor<TrapSpaceNode> |
TrapSpaceTreeGUIHelper.getNodeEditionPanel(TrapSpaceInclusionDiagram tree) |
Modifier and Type | Class and Description |
---|---|
class |
TreeActionPanel
This action panel allow the user to select the
* omdd representation method
* the gene associated with the logical function to display (in the case of regulatoryGraph)
|
Modifier and Type | Method and Description |
---|---|
GUIEditor<TreeEdge> |
TreeGUIHelper.getEdgeEditionPanel(Tree graph) |
GUIEditor<Tree> |
TreeGUIHelper.getMainEditionPanel(Tree tree) |
GUIEditor<TreeNode> |
TreeGUIHelper.getNodeEditionPanel(Tree graph) |
Modifier and Type | Class and Description |
---|---|
class |
StyleEditor |
Modifier and Type | Class and Description |
---|---|
class |
AbstractParameterPanel<G extends Graph,T>
All parameter panels must extend this abstract class to be updated on selection changes
|
Modifier and Type | Class and Description |
---|---|
class |
ObjectEditor<T>
An ObjectEditor acts as proxy between an object and the UI to edit its properties.
|
Modifier and Type | Class and Description |
---|---|
class |
StatesToHierarchicalEditTab
StatesToHierarchicalEditTab provides a ParameterPanel for the mainframe presenting information
on the hierarchicalNode corresponding to the selected DynamicNode.
|
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