org.ginsim.core.graph.hierarchicaltransitiongraph

Class DecisionOnEdge

java.lang.Object

org.ginsim.core.graph.Edge<HierarchicalNode>

org.ginsim.core.graph.hierarchicaltransitiongraph.DecisionOnEdge

All Implemented Interfaces:

ToolTipsable

public class DecisionOnEdge
extends Edge<HierarchicalNode>
implements ToolTipsable

Store a label that represent the genes that are updated between two states source, and target. In a HTG, to compute the label of an edge, call this function for each couple of states corresponding to the edge.

Author:

Duncan Berenguier

Field Summary

Fields inherited from class org.ginsim.core.graph.Edge

source, target

Constructor Summary

Constructors

Constructor and Description
DecisionOnEdge(HierarchicalTransitionGraph g, HierarchicalNode source, HierarchicalNode target, List<org.colomoto.biolqm.NodeInfo> nodeOrder)

Method Summary

Modifier and Type	Method and Description
void	computeChange(byte[] source, byte[] target) Compute the changes of a given edge (source, target)
String	toString() Return a string representation of the label with the name of the genes.
String	toToolTip() retrieve the tooltip text

Methods inherited from class org.ginsim.core.graph.Edge

getSource, getTarget

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

DecisionOnEdge

public DecisionOnEdge(HierarchicalTransitionGraph g,
                      HierarchicalNode source,
                      HierarchicalNode target,
                      List<org.colomoto.biolqm.NodeInfo> nodeOrder)

Method Detail

computeChange

public void computeChange(byte[] source,
                          byte[] target)

Compute the changes of a given edge (source, target)

Parameters:

source -

target -

toString

public String toString()

Return a string representation of the label with the name of the genes.

Overrides:

toString in class Edge<HierarchicalNode>

toToolTip

public String toToolTip()

Description copied from interface: ToolTipsable

retrieve the tooltip text

Specified by:

toToolTip in interface ToolTipsable

Overrides:

toToolTip in class Edge<HierarchicalNode>

Returns:

the string to be displayed in the tooltip