org.ginsim.core.graph.trapspacetree

Interface TrapSpaceInclusionDiagram

All Superinterfaces:

Graph<TrapSpaceNode,TrapSpaceInclusion>, GraphAssociation<RegulatoryGraph,RegulatoryNode,RegulatoryMultiEdge>, GraphModel<TrapSpaceNode,TrapSpaceInclusion>

All Known Implementing Classes:

TrapSpaceTreeImpl

public interface TrapSpaceInclusionDiagram
extends Graph<TrapSpaceNode,TrapSpaceInclusion>, GraphAssociation<RegulatoryGraph,RegulatoryNode,RegulatoryMultiEdge>

Trap-space inclusion diagram provide an over-approximation of the attractor reachability landscape.

Author:

Aurelien Naldi

Method Summary

Methods inherited from interface org.ginsim.core.graph.Graph

addViewListener, copyView, fireGraphChange, getAttributes, getDimension, getDisplayName, getEdgeAttributeReader, getNodeAttributeReader, getStyleManager, save, save, setAttribute

Methods inherited from interface org.ginsim.core.graph.GraphModel

addEdge, addNode, containsEdge, containsNode, getAnnotation, getEdge, getEdges, getExistingNode, getGraphName, getIncomingEdges, getNodeByName, getNodeCount, getNodeOrderSize, getNodes, getOutgoingEdges, getShortestPath, getStronglyConnectedComponents, getSubgraph, merge, removeEdge, removeNode, searchNodes, setGraphName

Methods inherited from interface org.ginsim.core.graph.GraphAssociation

getAssociatedGraph, getAssociatedGraphID, setAssociatedGraph, setAssociatedGraphID