Uses of Class
org.ginsim.service.tool.reg2dyn.SimulationParameters

Packages that use SimulationParameters

Package	Description
org.ginsim.service.tool.reg2dyn
org.ginsim.service.tool.reg2dyn.helpers
org.ginsim.service.tool.reg2dyn.htg
org.ginsim.service.tool.reg2dyn.limitedsimulation
org.ginsim.servicegui.tool.decisionanalysis
org.ginsim.servicegui.tool.reg2dyn	find the state transition graph from the regulatory one

Uses of SimulationParameters in org.ginsim.service.tool.reg2dyn

Methods in org.ginsim.service.tool.reg2dyn that return SimulationParameters

Modifier and Type	Method and Description
SimulationParameters	SimulationParameterList.add()
SimulationParameters	SimulationParameters.clone()

Methods in org.ginsim.service.tool.reg2dyn with parameters of type SimulationParameters

Modifier and Type	Method and Description
int	SimulationParameterList.add(SimulationParameters param, int index)
void	SimulationParameters.copy_to(SimulationParameters other, Map mapping)
Simulation	Reg2DynService.get(org.colomoto.biolqm.LogicalModel model, ProgressListener<Graph> plist, SimulationParameters currentParameter)
Perturbation	SimulationParameterList.getPerturbation(SimulationParameters param)
void	SimulationParameterList.list_item_removed(SimulationParameters param)

Constructors in org.ginsim.service.tool.reg2dyn with parameters of type SimulationParameters

Constructor and Description
Simulation(org.colomoto.biolqm.LogicalModel model, ProgressListener<Graph> frame, SimulationParameters params) Constructs an empty dynamic graph
SimulationParameterList(Graph<RegulatoryNode,RegulatoryMultiEdge> graph, SimulationParameters param)

Uses of SimulationParameters in org.ginsim.service.tool.reg2dyn.helpers

Constructors in org.ginsim.service.tool.reg2dyn.helpers with parameters of type SimulationParameters

Constructor and Description
HTGSimulationHelper(org.colomoto.biolqm.LogicalModel model, SimulationParameters params)
STGSimulationHelper(org.colomoto.biolqm.LogicalModel model, SimulationParameters params)

Uses of SimulationParameters in org.ginsim.service.tool.reg2dyn.htg

Constructors in org.ginsim.service.tool.reg2dyn.htg with parameters of type SimulationParameters

Constructor and Description
HTGSimulation(org.colomoto.biolqm.LogicalModel model, ProgressListener<Graph> plist, SimulationParameters params)

Uses of SimulationParameters in org.ginsim.service.tool.reg2dyn.limitedsimulation

Methods in org.ginsim.service.tool.reg2dyn.limitedsimulation with parameters of type SimulationParameters

Modifier and Type	Method and Description
DynamicGraph	LimitedSimulationService.run(HierarchicalTransitionGraph htg, SimulationConstraint constraint, org.colomoto.biolqm.LogicalModel model, SimulationParameters params) Construct the dynamic graph correponding the contraint on the HTG.

Constructors in org.ginsim.service.tool.reg2dyn.limitedsimulation with parameters of type SimulationParameters

Constructor and Description
LimitedSimulation(org.colomoto.biolqm.LogicalModel model, HierarchicalTransitionGraph htg, SimulationConstraint constraint, SimulationParameters params, ProgressListener<Graph> simulationManager) Constructs an empty dynamic graph
STGLimitedSimulationHelper(org.colomoto.biolqm.LogicalModel model, HierarchicalTransitionGraph htg, SimulationParameters params, SimulationConstraint constraint)

Uses of SimulationParameters in org.ginsim.servicegui.tool.decisionanalysis

Constructors in org.ginsim.servicegui.tool.decisionanalysis with parameters of type SimulationParameters

Constructor and Description
DecisionAnalysis(org.colomoto.biolqm.LogicalModel model, HierarchicalTransitionGraph htg, SimulationParameters params)

Uses of SimulationParameters in org.ginsim.servicegui.tool.reg2dyn

Method parameters in org.ginsim.servicegui.tool.reg2dyn with type arguments of type SimulationParameters

Modifier and Type	Method and Description
ListPanelCompanion	ListOfSimulationParametersHelper.getCompanion(ListEditionPanel<SimulationParameters,SimulationParameterList> editPanel)

Constructor parameters in org.ginsim.servicegui.tool.reg2dyn with type arguments of type SimulationParameters

Constructor and Description
SimulationParameterEditionPanel(ListEditionPanel<SimulationParameters,SimulationParameterList> editPanel, StackDialog dialog)