Uses of Package
org.ginsim.common.xml

Packages that use org.ginsim.common.xml

Package	Description
org.ginsim.common.xml	This package contains helpers to write and parse XML files.
org.ginsim.core.annotation	Manage annotations: bibliography, Database entries and links.
org.ginsim.core.graph.backend	Implementation of the graph backend.
org.ginsim.core.graph.dynamicgraph	State Transition Graphs, representing dynamical behaviours.
org.ginsim.core.graph.hierarchicaltransitiongraph
org.ginsim.core.graph.reducedgraph	Loop-free graphs where each node represents a strongly connected component of the original graph.
org.ginsim.core.graph.regulatorygraph	The regulatory graph is the main graph, it represents the model.
org.ginsim.core.graph.regulatorygraph.logicalfunction	Logical functions associated to nodes of the regulatory graph define their dynamical behaviour.
org.ginsim.core.graph.regulatorygraph.namedstates	Define states of a regulatory graph, which can be named and used as starting point for simulations.
org.ginsim.core.graph.regulatorygraph.perturbation	Perturbations to modify some parts of a model before analysis.
org.ginsim.core.graph.view	Define the layout and appearance of graph elements.
org.ginsim.core.graph.view.shapes
org.ginsim.core.graph.view.style	Styles define visual properties for graph elements.
org.ginsim.core.io.parser	Some tools to build parsers and writers for xml and text formats
org.ginsim.service.tool.avatar.params
org.ginsim.service.tool.modelreduction
org.ginsim.service.tool.reg2dyn
org.ginsim.service.tool.reg2dyn.priorityclass
org.ginsim.service.tool.reg2dyn.updater

Classes in org.ginsim.common.xml used by org.ginsim.common.xml

Class and Description
CallMode Define when to call the handler for an XML tag.
ParsingWarningReport Store all warnings found while parsing an XML document.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.core.annotation

Class and Description
XMLize Interface for object that can save themselves to XML.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.core.graph.backend

Class and Description
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.core.graph.dynamicgraph

Class and Description
XMLHelper Base class for XML parsers.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.core.graph.hierarchicaltransitiongraph

Class and Description
XMLHelper Base class for XML parsers.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.core.graph.reducedgraph

Class and Description
XMLHelper Base class for XML parsers.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.core.graph.regulatorygraph

Class and Description
XMLHelper Base class for XML parsers.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.core.graph.regulatorygraph.logicalfunction

Class and Description
XMLize Interface for object that can save themselves to XML.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.core.graph.regulatorygraph.namedstates

Class and Description
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.core.graph.regulatorygraph.perturbation

Class and Description
XMLHelper Base class for XML parsers.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.core.graph.view

Class and Description
SVGWriter XMLWriter extension with some SVG-specific methods.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.core.graph.view.shapes

Class and Description
SVGWriter XMLWriter extension with some SVG-specific methods.

Classes in org.ginsim.common.xml used by org.ginsim.core.graph.view.style

Class and Description
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.core.io.parser

Class and Description
XMLHelper Base class for XML parsers.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.service.tool.avatar.params

Class and Description
XMLize Interface for object that can save themselves to XML.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.service.tool.modelreduction

Class and Description
XMLize Interface for object that can save themselves to XML.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.service.tool.reg2dyn

Class and Description
XMLHelper Base class for XML parsers.
XMLize Interface for object that can save themselves to XML.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.service.tool.reg2dyn.priorityclass

Class and Description
XMLize Interface for object that can save themselves to XML.
XMLWriter A helper to write well formed XML documents.

Classes in org.ginsim.common.xml used by org.ginsim.service.tool.reg2dyn.updater

Class and Description
XMLize Interface for object that can save themselves to XML.
XMLWriter A helper to write well formed XML documents.