Package | Description |
---|---|
org.ginsim.core.graph.dynamicgraph |
State Transition Graphs, representing dynamical behaviours.
|
org.ginsim.core.graph.hierarchicaltransitiongraph | |
org.ginsim.core.graph.reducedgraph |
Loop-free graphs where each node represents a strongly connected component of the original graph.
|
org.ginsim.core.graph.regulatorygraph |
The regulatory graph is the main graph, it represents the model.
|
org.ginsim.core.graph.regulatorygraph.perturbation |
Perturbations to modify some parts of a model before analysis.
|
org.ginsim.core.io.parser |
Some tools to build parsers and writers for xml and text formats
|
org.ginsim.service.tool.reg2dyn |
Modifier and Type | Class and Description |
---|---|
class |
DynamicParser
Parse a GINML file containing a STG.
|
Modifier and Type | Class and Description |
---|---|
class |
HierarchicalTransitionGraphParser
Parse XML files defining hierarchical graphs.
|
Modifier and Type | Class and Description |
---|---|
class |
ReducedGraphParser
Load a SCC graph from GINML.
|
Modifier and Type | Class and Description |
---|---|
class |
RegulatoryParser
Load a regulatory graph from GINML.
|
Modifier and Type | Class and Description |
---|---|
class |
PerturbationParser
parser for perturbation definition file
|
Modifier and Type | Class and Description |
---|---|
class |
GinmlParser
Parser for GINML files.
|
class |
GsXMLHelper |
Modifier and Type | Class and Description |
---|---|
class |
SimulationParametersParser
parser for simulation parameters file
|
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