Uses of Package
org.ginsim.core.graph.regulatorygraph.perturbation

Packages that use org.ginsim.core.graph.regulatorygraph.perturbation

Package	Description
org.ginsim.core.graph.regulatorygraph.perturbation	Perturbations to modify some parts of a model before analysis.
org.ginsim.gui.graph.regulatorygraph.perturbation	GUI for the definition and selection of perturbations applied to a Regulatory Graph
org.ginsim.gui.utils.dialog.stackdialog	Definition of StackDialog: a run dialog where the main panel can be changed.
org.ginsim.service.format.ginml
org.ginsim.service.tool.avatar.params
org.ginsim.service.tool.circuit
org.ginsim.service.tool.interactionanalysis
org.ginsim.service.tool.localgraph
org.ginsim.service.tool.reg2dyn
org.ginsim.servicegui.export.nusmv
org.ginsim.servicegui.export.prism
org.ginsim.servicegui.export.sat
org.ginsim.servicegui.format.ginml
org.ginsim.servicegui.tool.avatar
org.ginsim.servicegui.tool.decisionanalysis
org.ginsim.servicegui.tool.localgraph
org.ginsim.servicegui.tool.reg2dyn	find the state transition graph from the regulatory one
org.ginsim.servicegui.tool.reg2dyn.limitedSimulation
org.ginsim.servicegui.tool.stablestates
org.ginsim.servicegui.tool.trapspace

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.core.graph.regulatorygraph.perturbation

Class and Description
ListOfPerturbations The list of perturbations associated to a regulatory graph.
Perturbation A perturbation is a (series of) change that can be applied to a regulatory graph.
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.gui.graph.regulatorygraph.perturbation

Class and Description
ListOfPerturbations The list of perturbations associated to a regulatory graph.
Perturbation A perturbation is a (series of) change that can be applied to a regulatory graph.
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.gui.utils.dialog.stackdialog

Class and Description
ListOfPerturbations The list of perturbations associated to a regulatory graph.
Perturbation A perturbation is a (series of) change that can be applied to a regulatory graph.
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.service.format.ginml

Class and Description
PerturbationStore Simple store for perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.service.tool.avatar.params

Class and Description
ListOfPerturbations The list of perturbations associated to a regulatory graph.
Perturbation A perturbation is a (series of) change that can be applied to a regulatory graph.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.service.tool.circuit

Class and Description
Perturbation A perturbation is a (series of) change that can be applied to a regulatory graph.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.service.tool.interactionanalysis

Class and Description
Perturbation A perturbation is a (series of) change that can be applied to a regulatory graph.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.service.tool.localgraph

Class and Description
Perturbation A perturbation is a (series of) change that can be applied to a regulatory graph.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.service.tool.reg2dyn

Class and Description
Perturbation A perturbation is a (series of) change that can be applied to a regulatory graph.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.servicegui.export.nusmv

Class and Description
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.servicegui.export.prism

Class and Description
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.servicegui.export.sat

Class and Description
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.servicegui.format.ginml

Class and Description
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.servicegui.tool.avatar

Class and Description
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.servicegui.tool.decisionanalysis

Class and Description
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.servicegui.tool.localgraph

Class and Description
Perturbation A perturbation is a (series of) change that can be applied to a regulatory graph.
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.servicegui.tool.reg2dyn

Class and Description
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.servicegui.tool.reg2dyn.limitedSimulation

Class and Description
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.servicegui.tool.stablestates

Class and Description
PerturbationHolder An interface for configuration objects who store a selected perturbation.

Classes in org.ginsim.core.graph.regulatorygraph.perturbation used by org.ginsim.servicegui.tool.trapspace

Class and Description
PerturbationHolder An interface for configuration objects who store a selected perturbation.